| # | Players | Clubs | Nationality | GC | More |
|---|---|---|---|---|---|
| 1 | Ben Garratt | Crewe Alexandra | England | 83 | |
| 2 | Tommy Lee | Chesterfield | England | 72 | |
| 3 | Ben Alnwick | Peterborough United | England | 58 | |
| 4 | Stuart Nelson | Gillingham | England | 57 | |
| 5 | Chris Maxwell | Fleetwood Town | Wales | 57 | |
| 6 | Daniel Bentley | Southend United | England | 56 | |
| 7 | Josh Lillis | Rochdale | England | 55 | |
| 8 | Jak Alnwick | Port Vale | England | 54 | |
| 9 | Lawrence Vigouroux | Swindon Town | England | 52 | |
| 10 | Thorsten Stuckmann | Doncaster Rovers | Germany | 48 | |
| 11 | Jamie Jones | Colchester United | England | 47 | |
| 12 | Elliot Parish | Colchester United | England | 46 | |
| 13 | Adam Davies (GK) | Barnsley | Wales | 44 | |
| 14 | Jayson Leutwiler | Shrewsbury Town | Canada | 43 | |
| 15 | Neil Etheridge | Walsall | Philippines | 43 | |
| 16 | Colin Doyle | Blackpool | Republic of Ireland | 42 | |
| 17 | George Long | Sheffield United | England | 42 | |
| 18 | Reice Charles-Cook | Coventry City | England | 40 | |
| 19 | Luke Daniels | Scunthorpe United | England | 39 | |
| 20 | Jon McLaughlin | Burton Albion | Scotland | 39 |
GC = Goals conceded