| # | Players | Clubs | Nationality | GC | More |
|---|---|---|---|---|---|
| 1 | Stuart Nelson | Gillingham | England | 79 | |
| 2 | Joe Murphy | Coventry City | Republic of Ireland | 78 | |
| 3 | Owain Fon Williams | Tranmere Rovers | Wales | 77 | |
| 4 | Bartosz Bialkowski | Notts County | Poland | 74 | |
| 5 | Chris Day | Stevenage | England | 71 | |
| 6 | Sam Walker | Colchester United | England | 63 | |
| 7 | Chris Weale | Shrewsbury Town | England | 55 | |
| 8 | Jon McLaughlin | Bradford City | Scotland | 54 | |
| 9 | Mark Oxley | Oldham Athletic | England | 54 | |
| 10 | Paul Jones | Crawley Town | England | 54 | |
| 11 | Declan Rudd | Preston North End | England | 51 | |
| 12 | David Martin | Milton Keynes Dons | England | 50 | |
| 13 | Chris Neal | Port Vale | England | 50 | |
| 14 | Wesley Foderingham | Swindon Town | England | 50 | |
| 15 | Richard O'Donnell | Walsall | England | 50 | |
| 16 | Robert Olejnik | Peterborough United | Austria | 49 | |
| 17 | Adam Collin | Rotherham United | England | 41 | |
| 18 | Ben Garratt | Crewe Alexandra | England | 40 | |
| 19 | David Button | Brentford | England | 39 | |
| 20 | George Long | Sheffield United | England | 36 |
GC = Goals conceded