| # | Players | Clubs | Nationality | GC | More |
|---|---|---|---|---|---|
| 1 | Aldo Simoncini | San Marino | San Marino | 48 | |
| 2 | Kamran Agayev | Azerbaijan | Azerbaijan | 26 | |
| 3 | Josep Gomes | Andorra | Andorra | 25 | |
| 4 | Jonathan Joubert | Luxembourg | Luxembourg | 21 | |
| 5 | Andrew Hogg | Malta | Malta | 19 | |
| 6 | Sergei Pareiko | Estonia | Estonia | 19 | |
| 7 | Antonis Georgallides | Cyprus | Cyprus | 17 | |
| 8 | Peter Jehle | Liechtenstein | Liechtenstein | 17 | |
| 9 | Nikolay Mihaylov | Bulgaria | Bulgaria | 13 | |
| 10 | Jakup Mikkelsen | Faroe Islands | Faroe Islands | 12 | |
| 11 | Dudu Aouate | Israel | Israel | 12 | |
| 12 | Volkan Demirel | Turkey | Turkey | 12 | |
| 13 | Andreas Isaksson | Sweden | Sweden | 11 | |
| 14 | Allan McGregor | Scotland | Scotland | 11 | |
| 15 | Zydrunas Karcemarskas | Lithuania | Lithuania | 11 | |
| 16 | Andris Vanins | Latvia | Latvia | 10 | |
| 17 | Stanislav Namasco | Moldova | Moldova | 10 | |
| 18 | Lee Camp | Northern Ireland | Northern Ireland | 10 | |
| 19 | Jan Mucha | Slovakia | Slovakia | 10 | |
| 20 | Samir Ujkani | Albania | Kosovo | 10 |
GC = Goals conceded