| # | Players | Clubs | Nationality | GC | More |
|---|---|---|---|---|---|
| 1 | Scott P Brown | Cheltenham Town | England | 72 | |
| 2 | Robert Burch | Lincoln City | England | 67 | |
| 3 | Jake Cole | Barnet | England | 65 | |
| 4 | Adam Bartlett | Hereford United | England | 62 | |
| 5 | Tony Roberts | Dagenham & Redbridge | Wales | 60 | |
| 6 | Artur Krysiak | Burton Albion | Poland | 59 | |
| 7 | Tommy Lee | Chesterfield | England | 58 | |
| 8 | Stephen Phillips | Shrewsbury Town | England | 57 | |
| 9 | Wayne Brown | Bury | England | 54 | |
| 10 | Barry Roche | Morecambe | Republic of Ireland | 54 | |
| 11 | Nick Colgan | Grimsby Town | Republic of Ireland | 53 | |
| 12 | Andy Warrington | Rotherham United | England | 52 | |
| 13 | Jonny Brain | Macclesfield Town | England | 48 | |
| 14 | David Button | Crewe Alexandra | England | 44 | |
| 15 | Chris Martin | Port Vale | England | 43 | |
| 16 | Shwan Jalal | AFC Bournemouth | England | 42 | |
| 17 | Simon Eastwood | Bradford City | England | 38 | |
| 18 | Mikhael Jaimez-Ruiz | Aldershot Town | Venezuela | 38 | |
| 19 | Shane Redmond | Burton Albion | Republic of Ireland | 38 | |
| 20 | Ian Dunbavin | Accrington Stanley | England | 37 |
GC = Goals conceded