| # | Players | Clubs | Nationality | GC | More |
|---|---|---|---|---|---|
| 1 | Glenn Morris | Crawley Town | England | 65 | |
| 2 | Joel Dixon | Barrow | England | 61 | |
| 3 | Scott P Brown | Port Vale | England | 60 | |
| 4 | Lawrence Vigouroux | Leyton Orient | England | 58 | |
| 5 | Mark Oxley | Southend United | England | 56 | |
| 6 | James McKeown | Grimsby Town | Republic of Ireland | 54 | |
| 7 | Dean Gerken | Colchester United | England | 52 | |
| 8 | Ian Lawlor | Oldham Athletic | Republic of Ireland | 51 | |
| 9 | James Belshaw | Harrogate Town | England | 46 | |
| 10 | Paul Farman | Carlisle United | England | 46 | |
| 11 | Joshua Griffiths | Cheltenham Town | England | 42 | |
| 12 | Mark Howard | Scunthorpe United | England | 39 | |
| 13 | Scott Davies | Tranmere Rovers | England | 38 | |
| 14 | Jamie Cumming | Stevenage | England | 37 | |
| 15 | Nick Townsend | Newport County | England | 37 | |
| 16 | Matthew Gilks | Bolton Wanderers | Scotland | 37 | |
| 17 | Vaclav Hladky | Salford City | Czech Republic | 36 | |
| 18 | Richard O'Donnell | Bradford City | England | 35 | |
| 19 | Liam Roberts | Walsall | England | 35 | |
| 20 | Luke McGee | Forest Green Rovers | England | 34 |
GC = Goals conceded