| Goals | Players | Sections | Competition |
|---|---|---|---|
| 2 | Jorge Molina | Group Section | UEFA Europa League 20/21 |
| 2 | Yangel Herrera | Group Section | UEFA Europa League 20/21 |
| 2 | Luis Suarez | Group Section | UEFA Europa League 20/21 |
| 2 | Roberto Soldado | Round of 16 | UEFA Europa League 20/21 |
| 1 | Darwin Machis | Group Section | UEFA Europa League 20/21 |
| 1 | Alberto Soro | Group Section | UEFA Europa League 20/21 |
| 1 | Kenedy | Round of 32 | UEFA Europa League 20/21 |
| 1 | Angel Montoro | Round of 32 | UEFA Europa League 20/21 |
UEFA Europa League 23/24 Top goal scorers