| Goals | Players | Sections | Competition |
|---|---|---|---|
| 6 | Manuel Fernandes | Group Stage | UEFA Europa League 17/18 |
| 6 | Dimitri Sychev | Group Stage | UEFA Europa League 11/12 |
| 5 | Aleksandr Samedov | Group Stage | UEFA Europa League 15/16 |
| 4 | Jefferson Farfan | Group Stage | UEFA Europa League 17/18 |
| 4 | Oumar Niasse | Group Stage | UEFA Europa League 15/16 |
| 3 | Denis Glushakov | Group Stage | UEFA Europa League 11/12 |
| 2 | Maicon | Group Stage | UEFA Europa League 15/16 |
| 2 | Maicon | Group Stage | UEFA Europa League 11/12 |
| 2 | Vladislav Ignatyev | Group Stage | UEFA Europa League 11/12 |
| 2 | Felipe Caicedo | Group Stage | UEFA Europa League 11/12 |
| 1 | Tino Anjorin | Group Stage | UEFA Europa League 21/22 |
| 1 | Anton Miranchuk | Group Stage | UEFA Europa League 17/18 |
| 1 | Igor Denisov | Round of 32 | UEFA Europa League 17/18 |
| 1 | Maciej Rybus | Round of 16 | UEFA Europa League 17/18 |
| 1 | Aleksei Miranchuk | Group Stage | UEFA Europa League 15/16 |
| 1 | Dmitri Tarasov | Group Stage | UEFA Europa League 15/16 |
| 1 | Victor Obinna | Group Stage | UEFA Europa League 11/12 |
UEFA Europa League 23/24 Top goal scorers